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Original file(Ogg Theora video file, length 2 min 4 s, 853 × 480 pixels, 2.79 Mbps)


English: Single simulation of pyruvate binding to DHDPS. Side-chains of several active site residues (Thr46, Tyr107, Tyr135, Arg140, and Lys163) are shown using stick representations. The video plays at a constant 0.04 ns frame-1, applying a smoothing window over 0.064 ns to both protein and ligand atoms. Water and ions have been omitted for clarity.
Source S1 Video from Gordon S, Weber D, Downton M, Wagner J, Perugini M (2016). "Dynamic Modelling Reveals ‘Hotspots’ on the Pathway to Enzyme-Substrate Complex Formation". PLOS Computational Biology. DOI:10.1371/journal.pcbi.1004811. PMID 26967332. PMC: 4788353.
Author Gordon S, Weber D, Downton M, Wagner J, Perugini M
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