File:Fgene-02-00069-g004 (14235962177).jpg
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Source: Front. Genet., 05 October 2011 | doi:10.3389/fgene.2011.00069 Molecular evolution of the non-coding eosinophil granule ontogeny transcript Dominic Rose and Peter F. Stadler Figure 4. Splice site conservation. We evaluated the similarity of our splice site candidates to real splice sites using MaxEntScan (Yeo and Burge, 2004) and a novel log-odds scoring scheme that also takes phylogenetic information into account (Rose et al., 2011). (A) Draft genomes like hyrax or tenrec as well as genomes with additional insertions compared to human, such as mouse or rat, exhibit a weak MaxEntScan donor signal. However, the majority (75%) of tested splice sites (46/64) are likely real according to MaxEntScan. (B) Evolutionary traces of substitutions at EGO-B acceptors. Green edges indicate substitution events that are in agreement to real splice sites, red edges indicate unusual substitution patterns. (C) Sequence logos for the putative donor (left) and acceptor sites (right). |
| Date | |
| Source | fgene-02-00069-g004 |
| Author | Phylogeny Figures |
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This file is licensed under the Creative Commons Attribution 2.0 Generic license.
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This image was originally posted to Flickr by phylofigures at https://flickr.com/photos/123636286@N02/14235962177. It was reviewed on 19 December 2020 by FlickreviewR 2 and was confirmed to be licensed under the terms of the cc-by-2.0. |
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| current | 15:01, 19 December 2020 | | 490 × 639 (223 KB) | Eyes Roger (talk | contribs) | Transferred from Flickr via #flickr2commons |
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