File:Puyuk Lake pollen diagram 1.svg

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Original file(SVG file, nominally 720 × 900 pixels, file size: 116 KB)

Captions

Captions

Pollen diagram of Puyuk Lake, Alaska, Beringia

Summary[edit]

Description
English: Pollen diagram of Puyuk Lake, Alaska, Beringia
Date
Source Own work
Author Merikanto

This image is based global pollen data from Neotoma.


Puyuk Lake Site ID 1920 Longitude -162,2 Latitude 63,5 Description Maar crater on volcanic island. Physiography: subdued rounded hills and volcanic cones. Surrounding vegetation: mesic low-shrub tundra.

PIs: Ager, Thomas A.

Ager, T.A. 1980. A 16,000 year pollen record from St. Michael Island, Norton Sound, western Alaska. Page 3 in American Quaternary Association, Sixth Biennial Meeting, Abstracts and Program, 18-20 August 1980. Institute for Quaternary Studies, University of Maine, Orono, Maine, USA.

Ager, T.A. 1982. Vegetational history of western Alaska during the WIsconsin glacial interval and the Holocene. Pages 75-93 in D.M. Hopkins, J.V. Matthews, Jr., C.E. Schweger, and S.B. Young, editors. Paleoecology of Beringia. Academic Press, New York, New York, USA.

Ager, T.A., and J.P. Bradbury. 1982. Quaternary history of vegetation and climate of the Yukon Delta-Norton Sound Area. In W.L. Conrad, editor. The United States Geological Survey in Alaska: Accomplishments during 1981. U.S. Geological Survey Circular 868:103-105.

Ager, T.A., and L.B. Brubaker. 1985. Quaternary palynology and vegetational history of Alaska. Pages 353-384 in V.M. Bryant, Jr. and R.G. Holloway, editors. Pollen records of late Quaternary North American sediments. American Association of Stragigraphic Palynologists Foundation, Dallas, Texas, USA.

PIs: Ager, Thomas A.

Ager, T.A. 1980. A 16,000 year pollen record from St. Michael Island, Norton Sound, western Alaska. Page 3 in American Quaternary Association, Sixth Biennial Meeting, Abstracts and Program, 18-20 August 1980. Institute for Quaternary Studies, University of Maine, Orono, Maine, USA.

Ager, T.A. 1982. Vegetational history of western Alaska during the WIsconsin glacial interval and the Holocene. Pages 75-93 in D.M. Hopkins, J.V. Matthews, Jr., C.E. Schweger, and S.B. Young, editors. Paleoecology of Beringia. Academic Press, New York, New York, USA.

Ager, T.A., and J.P. Bradbury. 1982. Quaternary history of vegetation and climate of the Yukon Delta-Norton Sound Area. In W.L. Conrad, editor. The United States Geological Survey in Alaska: Accomplishments during 1981. U.S. Geological Survey Circular 868:103-105.

Ager, T.A., and L.B. Brubaker. 1985. Quaternary palynology and vegetational history of Alaska. Pages 353-384 in V.M. Bryant, Jr. and R.G. Holloway, editors. Pollen records of late Quaternary North American sediments. American Association of Stragigraphic Palynologists Foundation, Dallas, Texas, USA.

  1. Pollen diagram, arranged by pollen %
  2. "R" script, uses neotoma, ggplot2 ...
  3. 22.10.2021 0000.0000
    1. original src
    2. http://paleoecologie.umontreal.ca/684-2/

library(ggplot2) library(grid) library(neotoma) library(analogue) library(rioja) library(ggdendro) library(gridExtra)

sitename1='Puyuk Lake' sitename2=paste0(sitename1,'%')

suze <- get_site(sitename = sitename2) suze_pollen=get_dataset(suze) suze_data=get_download(suze_pollen)

  1. head(suze_data1$counts)

core.pct <- data.frame(tran(suze_data1$counts, method = 'percent'))

age <- suze_data1$sample.meta$age core.pct <- chooseTaxa(core.pct, max.abun = 10)

  1. Stratiplot(age ~ ., core.pct, sort = 'wa', type = 'poly',
  2. ylab ='Years Before Present')


df=data.frame(yr=rep(age,ncol(core.pct)),
per=as.vector(as.matrix(core.pct)),
taxa=as.factor(rep(colnames(core.pct),each=nrow(core.pct))))

theme_new <- theme(panel.grid.major = element_blank(), panel.grid.minor = element_blank(), # remove grids
panel.background = element_blank(), axis.line = element_line(colour = "black"),
strip.text.x = element_text(size=14, angle=90, vjust=0), # Taxa names
strip.background = element_blank(),
strip.text.y = element_text(angle = 0),
legend.position="none",panel.border = element_blank(),
axis.text.x=element_text(angle=45,hjust=1)) # Axis tick label angle


diag= ggplot(df)+

theme(text = element_text(size = 14))+
ggtitle(sitename1)+
theme(plot.title = element_text(size = 20, face = "bold" ) ) +
geom_line(aes(yr,per))+
geom_area(aes(yr,per))+
scale_x_reverse(breaks =seq(0,100000,1000))+
scale_y_continuous(breaks =seq(0,100,10))+
xlab("Age (cal. BP)")+ylab("pollen %")+
coord_flip()+
theme_new+
facet_grid(~df$taxa,scales = "free", space = "free")+



svg(filename="./puyuk_lake_pollen_1.svg", width=8, height=10, pointsize=16)


diag

dev.off()

print(".")

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Date/TimeThumbnailDimensionsUserComment
current12:57, 22 October 2021Thumbnail for version as of 12:57, 22 October 2021720 × 900 (116 KB)Merikanto (talk | contribs)Uploaded own work with UploadWizard

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