File:Molecular-Dynamics-Simulations-of-the-Bacterial-UraA-H+-Uracil-Symporter-in-Lipid-Bilayers-Reveal-a-pcbi.1004123.s016.ogv
Molecular-Dynamics-Simulations-of-the-Bacterial-UraA-H+-Uracil-Symporter-in-Lipid-Bilayers-Reveal-a-pcbi.1004123.s016.ogv (Ogg Theora video file, length 1 min 10 s, 528 × 544 pixels, 1.78 Mbps, file size: 14.91 MB)
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DescriptionMolecular-Dynamics-Simulations-of-the-Bacterial-UraA-H+-Uracil-Symporter-in-Lipid-Bilayers-Reveal-a-pcbi.1004123.s016.ogv |
English: Lipid binding to CL binding site 1. MD simulation showing the diffusion of two single CL molecules (green) and a POPG molecule (red) in a lipid bilayer and their binding to the CL site 1 on UraA (shown using the residues R4 and R299). Note that in the video UraA is centered in the bilayer for clarity and a smoothing of the trajectory every 10 frames was performed. In the simulation the protein is free to diffuse. |
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Source | S3 Video from Kalli A, Sansom M, Reithmeier R (2015). "Molecular Dynamics Simulations of the Bacterial UraA H+-Uracil Symporter in Lipid Bilayers Reveal a Closed State and a Selective Interaction with Cardiolipin". PLOS Computational Biology. DOI:10.1371/journal.pcbi.1004123. PMID 25729859. PMC: 4346270. | ||
Author | Kalli A, Sansom M, Reithmeier R | ||
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This file is licensed under the Creative Commons Attribution 4.0 International license.
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Date/Time | Thumbnail | Dimensions | User | Comment | |
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current | 21:39, 18 March 2015 | 1 min 10 s, 528 × 544 (14.91 MB) | Open Access Media Importer Bot (talk | contribs) | Automatically uploaded media file from Open Access source. Please report problems or suggestions here. |
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Short title | Lipid binding to CL binding site 1. |
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Author | Kalli A, Sansom M, Reithmeier R |
Usage terms | http://creativecommons.org/licenses/by/4.0/ |
Image title | MD simulation showing the diffusion of two single CL molecules (green) and a POPG molecule (red) in a lipid bilayer and their binding to the CL site 1 on UraA (shown using the residues R4 and R299). Note that in the video UraA is centered in the bilayer for clarity and a smoothing of the trajectory every 10 frames was performed. In the simulation the protein is free to diffuse. |
Software used | Xiph.Org libtheora 1.1 20090822 (Thusnelda) |
Date and time of digitizing | 2015-03-02 |